AMBER Archive (2003)

Subject: leap complains!

From: Layi Adekoya (adekoya_at_fagmed.uit.no)
Date: Thu May 22 2003 - 06:56:11 CDT

Hello,
I need help!!
I am trying to modell an unnatural amino acid.
A charged serine (that has lost it's hydrogen)
I have built it with leap. I have an unstandard
residue type. I have specified the new type as '03'.since the oxygen
ceases to be the usual hydroxyl oxygen.
Leap is however complaining saying the new type not found.
What do I do to help leap accept this new type?
I am using amber7.

Help will be greatly appreciated.

Layi