AMBER Archive (2003)

Subject: carnal hbond

From: Hai-Long Wang (hwang_at_mayo.edu)
Date: Wed Apr 30 2003 - 13:03:39 CDT

Hi, All

I am using carnal to analize hydrogen bond. When I used the example input
file on users' manual. It will list all possible hbond. I want the hbond
between subunits. e.g. I have two subunits, 1~100 is sub A, 101~200 is sub
B. How can I define the input file so the carnal will only list the hbond
between sub A and sub B?

Thanks

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Hai-Long Wang Ph.D. Tel: (507)284-5297
Receptor Biology Laboratory Fax: (507)284-9420
1-149, Medical Science Building email: wang.hailong_at_mayo.edu
Mayo Foundation
Rochester, MN 55905
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