AMBER Archive (2003)

Subject: question about lysine?

From: Lishan Yao (yaolisha_at_pilot.msu.edu)
Date: Wed Feb 26 2003 - 16:23:38 CST

Hi:
   I want to change my lysine from protonated form to deprotonated form to run
MD. How can I do that? Do I need to generate force parameters for it, just like
an organic molecule, or can I find a easy way to do it?

Thanks.

Lishan