AMBER Archive (2003)

Subject: question on ptraj

From: Ioana Cozmuta (ioana_at_nas.nasa.gov)
Date: Wed Jan 22 2003 - 15:01:26 CST

Hi amber users,

I am trying to calculate the self diffusion coefficient of water using
ptraj
trajin /stor/ioana/tmp_data/box_water/box40Aspc_nve.mdcrd
diffusion :WAT 0.1 watboxd
go

However I can not vi the generated files as the editor complains with
"line too long". I did try to use other editors but in none of them the
file can be open. Any idea how I can go around this?

Thank you in advance,
Ioana