AMBER Archive (2003)

Subject: Re: xleap crashes

From: David Case (case_at_scripps.edu)
Date: Sat Jan 11 2003 - 00:05:45 CST


On Fri, Jan 10, 2003, Layi Adekoya wrote:

> I have a system where I made a bond between
> my ligand and the protein. When I write the command
> to saveamberparm *.top *.crd Xleap crashes.
> We have fixed bug 2 and we seem to be stuck now.

What exact commands did you use? saveambparm requires three arguments,
not two. At a minimum, we would need to know the exact commands
you tried, plus what sort of computer, and which version of Amber.
It may also be necessary to get other input files, but try providing the above
information first.

...dac

-- 

================================================================== David A. Case | e-mail: case_at_scripps.edu Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps Research Institute | phone: +1-858-784-9768 10550 N. Torrey Pines Rd. | home page: La Jolla CA 92037 USA | http://www.scripps.edu/case ==================================================================