AMBER Archive (2002)

Subject: bad protein structure

From: eric hu (erichu_linux_at_yahoo.com)
Date: Tue Dec 10 2002 - 19:30:52 CST

Hi, I have a homology based protein. I want to
minimize it first. However the common minimization
(even freeze part of or the whole protein) fails each
time because of the bad energetics. I wonder if there
is a way to minimize more effectively. Thanks.

Eric

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