AMBER Archive (2002)

Subject: Re: Biphasic box

• Next message: David A. Case: "Re: freeware for RNA modeling on Linux (fwd)"
• Previous message: Guanglei Cui: "corrupted trajectory"
• In reply to: amber_at_heimdal.compchem.ucsf.edu: "Biphasic box (fwd)"
• Next in thread: Gemma Kinsella: "Re: Biphasic box"
• Reply: Gemma Kinsella: "Re: Biphasic box"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ]

On Tue, Dec 03, 2002, amber_at_heimdal.compchem.ucsf.edu wrote:
>
> From: Gemma Kinsella <maynooth_at_maths.tcd.ie>
>
> FATAL: Atom .R<CL3 355>.A<H1 1> does not have a type.
> FATAL: Atom .R<CL3 355>.A<C1 2> does not have a type.
> FATAL: Atom .R<CL3 355>.A<CL1 3> does not have a type.
> FATAL: Atom .R<CL3 355>.A<CL2 4> does not have a type.
> FATAL: Atom .R<CL3 355>.A<CL3 5> does not have a type.

Have you given the "loadAmberParams frcmod.chcl3" command to LEaP? This
is needed to have LEaP know about chloroform parameters.

..hope this helps...dac

-- 
==================================================================
David A. Case                     |  e-mail:      case_at_scripps.edu
Dept. of Molecular Biology, TPC15 |  fax:          +1-858-784-8896
The Scripps Research Institute    |  phone:        +1-858-784-9768
10550 N. Torrey Pines Rd.         |  home page:                   
La Jolla CA 92037  USA            |    http://www.scripps.edu/case
==================================================================

• Next message: David A. Case: "Re: freeware for RNA modeling on Linux (fwd)"
• Previous message: Guanglei Cui: "corrupted trajectory"
• In reply to: amber_at_heimdal.compchem.ucsf.edu: "Biphasic box (fwd)"
• Next in thread: Gemma Kinsella: "Re: Biphasic box"
• Reply: Gemma Kinsella: "Re: Biphasic box"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ]