AMBER Archive (2002)

Subject: Re: the removal of global motion

From: David A. Case (case_at_scripps.edu)
Date: Tue Nov 12 2002 - 18:18:31 CST


On Tue, Nov 12, 2002, Ioana Cozmuta wrote:
>
> If one sets NSCM=0 then the translational and rotational motion will NOT
> be removed?

This is correct.

> Is there a way for non-periodic simulations to remove only the rotational
> or only the translational motion?

Modify the source. The routine in questions is called stopcm().

..dac

-- 

================================================================== David A. Case | e-mail: case_at_scripps.edu Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps Research Institute | phone: +1-858-784-9768 10550 N. Torrey Pines Rd. | home page: La Jolla CA 92037 USA | http://www.scripps.edu/case ==================================================================