AMBER Archive (2002)

Subject: Solvent exposed surface area over a trajectory

From: Rebecca Perlow (perlow_at_alum.mit.edu)
Date: Thu Oct 17 2002 - 13:20:03 CDT

Dear AMBER users,

I am wondering if anyone knows of a program that will calculate the
solvent exposed surface are of a residue or group of atoms over a
trajectory. I know that the Insight program calculates the value for a
static structure, but I wanted to get this value over an entire
trajectory.

Thanks in advance for any suggestions.

-Rebecca Perlow

Rebecca A. Perlow, Ph.D.
Department of Biology
New York University
100 Washington Square East
New York, NY 10003
Tel: (212)998-8228
E-mail: perlow_at_alum.mit.edu