AMBER Archive (2002)

Subject: Re: a freeware to display RMSD matrices

From: CUI, Guanglei (cuigl_at_morita.chem.sunysb.edu)
Date: Thu Sep 19 2002 - 08:42:29 CDT

Hi,
    Moil-view can calculate 2d-rmsd from an amber trajectory and save it
    as postscript file. If you have it calculated already, opendx is a
    very good general-purpose data visualization tool. But it takes some
    time to start though. Hope this will help.

    Regards,

On Thu, 19 Sep 2002, Vlad Cojocaru wrote:

> Dear Amber users,
> Does anyone know a freeware that is able to display three dimensional
> RMSD matrices from an MD trajectory???
> vlad
>
> 

-- 
Guanglei Cui
Dept. of Chemistry
SUNY at Stony Brook
Stony Brook, NY 11790