AMBER Archive (2002)

Subject: Re: Density during equilibration (sander)

From: Marc Dobler (marc_at_mummy.tokai.jaeri.go.jp)
Date: Wed Sep 18 2002 - 02:11:21 CDT

i checked that before all runs : it always reads the last files,
parm.top and previous_run.cor.
with irest = 1, ntx = 5.

> this doesn't make any sense to me, how can the density
> change with the volume and mass fixed?
> maybe when you restarted you didn't read in the
> new box coordinates when you restarted?
>
>