AMBER Archive (2002)

Subject: protein minimization

From: m.elizabeth sophia (mesophia_at_niper.ac.in)
Date: Tue Sep 03 2002 - 11:01:35 CDT

We are doing some docking studies. Is there a common method for
minimizing the
protein structures. In my case the structures of proteins after
minimization,
seem to deviate from the original structure. Please assist.
Sophia