AMBER Archive (2002)

Subject: Re: How to make mpeg files from amber trajectories (fwd)

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One can also use gOpenMol software with SnagIt

1. convert AMBER ascii trajectory to binary format by ambera2b (from
gOpenMol package)
2. import PDB file of the system (with all residues - carnal can
convert .crd and .top to .pdb)
3. load binary trajectory to gOpenMol
4. run it
5. use software to capture video (SnagIt is very good)
6. you can edit video by e.g. VD (virtualdub)

gOpenMol is powerfull tool for visualization!

gOpenMol: http://staff.csc.fi/~laaksone/gopenmol/gopenmol.html
SnagIt: e.g. http://www.techsmith.com/products/snagit/technicalwriters.asp
VirtualDub: http://www.virtualdub.org/index

Michal Otyepka

• Next message: Andreas Kerzmann: "What's this "interface" the tutorial talks about?"
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• Maybe in reply to: amber_at_heimdal.compchem.ucsf.edu: "How to make mpeg files from amber trajectories (fwd)"
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