AMBER Archive (2002)

Subject: Re: check-up question

From: David A. Case (case_at_scripps.edu)
Date: Tue Aug 06 2002 - 16:14:56 CDT


On Tue, Aug 06, 2002, Cozmuta wrote:
>
>
> So this means that there is no error in the structure and the 7 units are
> treated (and saved as well in the topology and coordinate file) as
> independent.

One way to check for yourself is to use ambpdb to create a pdb file, and look
to see where the "TER" cards are. ("TER" cards come between separate
molecules in the pdb file.)

..dac

-- 

================================================================== David A. Case | e-mail: case_at_scripps.edu Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps Research Institute | phone: +1-858-784-9768 10550 N. Torrey Pines Rd. | home page: La Jolla CA 92037 USA | http://www.scripps.edu/case ==================================================================