AMBER Archive (2002)

Subject: Re: Using the new2oldparm command

From: Pascal Bonnet (pascal.bonnet_at_man.ac.uk)
Date: Fri Aug 02 2002 - 03:17:54 CDT

Hi,

As Karen Haskell has written in a previous email, you have to include
the path of AMBERHOME.
Also, to execute new2oldparm, write:
new2oldparm < version7filename > version6filename
and not new2oldparm version7filename version6filename

pb

dianah_at_unm.edu wrote:
>
> Hi,
>
> I am trying to convert my Amber7 parameter/topology file and molecular
> dynamics trajectory file into an Amber6 file format so that I can use
> them to generate a movie using the VMD display programm. I know that
> there is a command/programm (?) \"new2oldparm\" available that would
> convert these files. I don\'t know how to use that program/command or
> where I can find information about how to use it. I could not find
> anything in the Amber7 user\'s manual, or on the website.
>
> Can anyone help?
> Am I supposed to use this command in any particular program of the
> AmberSuite?
> I tried typing \"new2oldparm version7filename version6filename\", but the
> program\'s response was \"command not found.\"
>
> Thank you for any suggestions
>
> Diana Habel-Rodriguez 

-- 
***************************************************
 Dr. Pascal Bonnet
 School of Pharmacy and Pharmaceutical Sciences,
 University of Manchester, Oxford Road,
 Manchester, M13 9PL, U.K
 Tel:(+44) (0)161 275 2431
 http://www.man.ac.uk/~mbpsspb3