AMBER Archive (2002)

Subject: parameter file for MgGTP

From: Holger Sondermann (sonderh_at_uclink.berkeley.edu)
Date: Tue Jul 02 2002 - 20:34:24 CDT

Hi,
I would like to run a MD simulation of a protein/GTP complex. I was
wondering if there is a magnesium(2+)/GTP parameter file around which I
could use. I'm intending to use the Amber94 (Cornell et al.) force field.

Thanks a lot for your help.
Best wishes,
Holger

------------------------------------------
Holger Sondermann, Ph.D.
Dept. of Molecular & Cell Biology
Kuriyan Lab
401 Barker MC 3202
University of California, Berkeley
Berkeley, CA 94720-3202
USA
Phone: +1 (510)-643-0166
Fax: +1 (510)-643-2352
Email: sonderh_at_uclink.berkeley.edu
       hsonderm_at_yahoo.com