AMBER Archive (2002)

Subject: subdomain moving as a rigid unit during MD

From: Marcela Madrid (mmadrid_at_psc.edu)
Date: Fri May 24 2002 - 10:59:40 CDT

Hi,

I have a subdomain in a molecule and I want it to move as a rigid unit
during MD.
I do not want to freeze it with belly, I want it to move but as a rigid
unit,
is there a way to do this? Can it be done with the nmr constraints,
using makeRIGID_RST
or the other auxiliary programs?
thanks again,

Marcela