AMBER Archive (2002)

Subject: still having ptraj problems

From: Jake Isaacs (rjisaa0_at_uky.edu)
Date: Wed May 22 2002 - 10:19:06 CDT

my script is now as follows:

trajin dna.crd 1001 2000 1
reference dna-avg.crd
rms reference mass out dna-rms.out *
trajout dna1001-2000-rms.crd
go

There is still no output to dna-rms.out. Do I need to specify a different
mask in line 4, or does the mask belong elsewhere in the line?

  .-. .-. .-. .-. .------------------------. .-. .-. .-. .-.
 /|||X|||\ /|||X|||\ / Richard J. (Jake) Isaacs \ /|||X|||\ /|||X|||\
X|||/ \|||X|||/ \|||X Department of Molecular X|||/ \|||X|||/ \|||X
 `-' `-' `-' `-' \ & Cellular Biochemistry / `-' `-' `-' `-'
 .-. .-. .-. .-. / University of Kentucky \ .-. .-. .-. .-.
X|||\ /|||X|||\ /|||X 800 Rose St. X|||\ /|||X|||\ /|||X
 \|||X|||/ \|||X|||/ \ Lexington, KY 40536-0084 / \|||X|||/ \|||X|||/
  `-' `-' `-' `-' `------------------------' `-' `-' `-' `-'