AMBER Archive (2002)

Subject: Re: PDB file with CONECT record

From: Prabal Maiti (maiti_at_wag.caltech.edu)
Date: Tue Apr 16 2002 - 00:48:00 CDT

Thanks for all the suggestions. MOILview did get the correct bond info
from the AMBER topology file.
Prabal

On Fri, 12 Apr 2002, Bill Ross wrote:

> > Ok, I understand that ambpdb and ptraj dont genertae
> > CONECT records, but then how do I see my sander
> > minimized/dynamics structure with the
> > modified/edited bond
>
> Modify ambpdb or ptraj (or carnal) to add CONECT
> records. Or perhaps MOILview can get bond info from
> prmtop - it wouldn't surprise me.
>
> Bill Ross
>
> __________________________________________________
> Do You Yahoo!?
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> http://taxes.yahoo.com/
> 

-- 
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Prabal K Maiti                             Email:maiti_at_wag.caltech.edu
Beckman Institute (139-74)                       pkmaiti_at_yahoo.com
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