AMBER Archive (2002)

Subject: resizing and recompiling sander

From: UMEMOTO kimiko (umemoto_at_icu.ac.jp)
Date: Mon Jan 14 2002 - 19:12:02 CST

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Sir,

While running sander for minimization, the program stopped giving messages;

     Real Memory requirement of: 2570423 exceeds MAXREA of 2500000
     Static Integer Memory requirement of: 2986092 exceeds MAXINT of 2000000

so I resized both parameters MAXREA and MAXINT in /sander/size.h.
Then I recompiled sander by running 'make install'. The compilation,
however, was not completed giving an error message at the end:
******************************
.....................
ug.o ew_recip_reg.o ew_handle_dips.o ew_dipole_recip.o mexit.o egb.o
yammpnb.o .
./lapack/lapack.a ../blas/blas.a /homef/users/za9/amber6/src/Machines/sgi/sys.a
-lblas -lcomplib.sgimath -lfastm
ld32: WARNING 84 : ../lapack/lapack.a is not used for resolving any symbol.
ld32: WARNING 84 : ../blas/blas.a is not used for resolving any symbol.
ld32: FATAL 12 : Expecting n32 objects:
/homef/users/za9/amber6/src/Machines/s
gi/sys.a(sys.o) is o32.
*** ERROR CODE 1 (bu21)
******************************
Will you please explain the error message?
I am running AMBER 6.0 on Origin 2000 (IRIX 6.4), on a 137 residue protein
surrounded by 11030 water molecules.

Thank you in advance,

K. Umemoto 

-- 
************************
Department of Chemistry
International Christian University
3-10-2 Osawa, Mitaka
Tokyo 181-8585, Japan

E-mail: umemoto_at_icu.ac.jp
Tel:(+81)422-33-3256
Fax:(+81)422-33-1449
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