AMBER Archive (2002)

Subject: Re: linux?

From: Carlos Simmerling (carlos.simmerling_at_sunysb.edu)
Date: Fri Jan 04 2002 - 07:55:15 CST

We have a page on the AMBER site that discusses running AMBER on
Linux clusters and gives some benchmarks and other information.
It is based is certainly not comprehensive, but it should get you started.

http://www.amber.ucsf.edu/amber/cluster_info/index.html

===================================================================
Carlos L. Simmerling, Ph.D.
Assistant Professor Phone: (631) 632-1336
Department of Chemistry Fax: (631) 632-1555
SUNY at Stony Brook Web: http://comp.chem.stonybrook.edu/carlos
Stony Brook, NY 11794-3400 E-mail: carlos.simmerling_at_stonybrook.edu
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----- Original Message -----
From: "Shixiang Yan" <sy8_at_SCIRES.ACF.NYU.EDU>
To: <amber_at_heimdal.compchem.ucsf.edu>
Sent: Thursday, January 03, 2002 9:17 PM
Subject: linux?

> dear colleagues... i was wondering if we have any successful examples in
> running amber on linux machines, both on the 2-node machine or on the
> cluster... do we need a fast network between the machines to have
> reasonable scaling?.. thanks a million for any commnents... s. yan
>
>