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AMBER Archive (2001)Subject: diffusion
From: Raja Swaminathan (rajaamber6_at_rediffmail.com)
Dear amber users
1. I have done a 2ns MD on DNA duplex and i want to analyse water and counterions over the entire run.
2. what is the exact physical meaning of diffusion and correlation option in ptraj. what it does exactly.
Please provide me some example inputs regarding the queries.
Thanking you in advance
Raja Swaminathan
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