AMBER Archive (2001)

Subject: RMS calculations

From: Nikolai Smolin (smolin_at_steak.chemie.uni-dortmund.de)
Date: Wed Nov 21 2001 - 07:34:54 CST

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Dear AMBER users,

I used AMBER for simulation of proteins.
And I want to calculate RMS (root mean square).
I know that ptraj, anal and carnal can calculate RMS.
But what programm better and what difference?

Thanks in advance.

Nikolai Smolin

Physikalische Chemie I
Universit?t Dortmund
Otto-Hahn-Str. 6
44221 Dortmund
Germany

Fax: +49 / 231 / 755 3901
E-mail: smolin_at_steak.chemie.uni-dortmund.de

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