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AMBER Archive (2001)Subject: Re: parm warnings
From: Bill Ross (ross_at_cgl.ucsf.edu)
I have recently mutated a 3' terminal base on a 14 mer DNA duplex. Upon
The only consequence of not having chain types marked
If you want this, you need to set the connect atoms in
> loadamberprep MUT.prep
From other errors I received in getting the prep file ready, it
No - it is from a nonstandard residue.
Because the mutated base (it actually has a dye attached
Leap knows nothing of complementarity of strands.
Bill Ross
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