AMBER Archive (2001)

Subject: Nonbonded Pair List

From: Troy Bothwell (tbothwe1_at_bigred.unl.edu)
Date: Fri Feb 02 2001 - 13:18:16 CST


Hello all,

It seems that the standard procedure of AMBER users is to update the
nonbonded pair list every 10 steps or so. In the AMBER 6.0 manual the
default is to update the list "whenever andy atom has moved more than 1/2
skinnb since the last update". There is an option to update the list the
"old" way, so I was wondering what was preferred.

Thanks for your input,

Troy