AMBER Archive (2000)

Subject: (no subject)

From: danilosili (danilosili_at_tiscalinet.it)
Date: Tue Dec 12 2000 - 03:27:57 CST

My name is Danilo Sili Scavalli
I'm doing in University of Rome "La Sapienza" my graduate thesis in computational chemestry.
I'm using Your program Amber 6.0 to do a minimizzation of a series of non-proteic compounds. My coordinate files are in mol2 format (draw with Sybyl). I know that I can edit these files in pdb format, but I had seen an "utilTripos" in Your program and I'd like to know how this utility works.
I try to run utilTripos but I didn't have an answer.
My purpose is to obtain a right conformation of bond between a protein and a non-protein ligand.
Thanks a lot. Danilo
danilosili
e-mail: danilosili_at_tiscalinet.it 

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