AMBER Archive (2000)

Subject: announcing mdxvu MD aanalysis code

From: Mark Forster (mforster_at_nibsc.ac.uk)
Date: Mon Nov 20 2000 - 10:30:58 CST


Dear Molecular Modellers

The mdxvu program (pronounded MDX view) is a molecular dynamics and molecular
structure analysis code. The program was initially developed as a lightweight
tool for visualising and analysing MD trajectories produced by the AMBER suite
of programs. Trajectories produced by the TINKER suite can now also be analysed
after file conversion. A file filter for handling the output of the DISCOVER
dynamics program is in development.

The binaries, a brief manual and example files for mdxvu are now available from
the site

     http://www.nibsc.ac.uk/mdxvu/

The mdxvu program uses the X11/Xlib library for graphics. It was developed and
tested on Silicon Graphics and Intel/Linux systems. The SGI executable should
run on R4000 or higher CPUs under Irix 6.5 or later. The Linux version was built
on a PIII system using Red Hat linux 6.1, this version has also been found to
work on a SuSE Linux 6.3 installation.

See the manual.htm file for a more detailed description of the program features.

Mark Forster

--

Dr Mark J Forster Ph.D. Principal Scientist Informatics Laboratory National Institute for Biological Standards and Control Blanche Lane, South Mimms, Hertfordshire EN6 3QG, United Kingdom.

Tel +44 (0)1707 654753 FAX +44 (0)1707 646730 E-mail mforster_at_nibsc.ac.uk