AMBER Archive (2000)

Subject: saveamberparm problem of new molecule

From: Mao Xiang (xmao_at_iris.sipp.ac.cn)
Date: Sun Oct 08 2000 - 03:52:46 CDT

Hello:
  I have build a molecule, and read it to xleap. When I saveamberparm of
it, it gives me the following information:
-----------------------------------------------------------
1-4: angle 4 22 duplicates bond ('triangular' bond) or angle ('square'
bond)

1-4: angle 18 20 duplicates bond ('triangular' bond) or angle ('square'
bond)
-----------------------------------------------
My question is what the number in the warning means, what will happen if
I ignore the warning. And How I can solve this problem. Thanks.

regards,
mao

  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| Xiang Mao |
| Lab of Molecular Regulation for Microbial Secondary Metabolism |
| Shanghai institute of Plant Physiology, Academia Sinica |
| 300 Fenglin Road, Shanghai, China, 200032 |
| Tel: +86-21-64042090-4791 |
| Fax: +86-21-64042385 |
  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~