AMBER Archive (2000)

Subject: excluded atoms in prmtop files

From: Andreas Svrcek-Seiler (svrci_at_tbi.univie.ac.at)
Date: Wed Sep 27 2000 - 09:27:37 CDT

We are currently trying to modify
AMBER prmtop files for our own pseudoatom model.
everything is quite clear except the 'excluded atoms'.
we would be grateful if someone could tell us
what this is all about. i.e. what are excluded atoms
for "atom i" (quoted from the AMBER docomentation) ?

best regards,
thanks in advance,
K. Gruenberger, A. Svrcek-Seiler 

-- 
             
            )))))
            (((((
           ( O O )
-------oOOO--(_)--OOOo-----------------------------------------------------
              o        Wolfgang Andreas Svrcek-Seiler  
              o        (godzilla) 
                       svrci_at_tbi.univie.ac.at
      .oooO            Tel.:01-4277-52733 
      (   )   Oooo.    
-------\ (----(   )--------------------------------------------------------
        \_)    ) /
              (_/