AMBER Archive (2000)

Subject: mdtoolchest

From: Cui Guanglei (cuigl_at_morita.chem.sunysb.edu)
Date: Wed Jun 07 2000 - 10:54:34 CDT

Hi,
   I still need some help on the use of mdtoolchest. The dialsandwindows
stopped at a particular frame when processing one of my trajectories,
giving the following messages.

>fmt: read unexpected character
>apparent state: unit 2 named dna.dna
>last format: (A4,3F10.5,2I2,F8.4,1X,A4,1X,I3,1X,I4)
>Unit 2 is a sequential formatted external file
>*** Execution Terminated (115) ***

I also attached this particular frame and the pdb file. Any suggestion
will be appreciated.

regards, 

-- 
Guanglei Cui
State University of New York
Department of Chemistry
Stony Brook, 11794-3400rdparm transformed trajectory, parm was ../vic.top
 -15.265   4.369  -3.649 -15.943   5.048  -3.651 -17.182   4.394  -3.963 -17.176
   4.249  -5.043 -18.020   5.039  -3.699 -17.357   2.995  -3.415 -18.439   2.904
  -3.328 -16.828   2.015  -4.280 -16.414   0.914  -3.488 -17.258   0.280  -3.215
 -15.428   0.040  -4.251 -14.798   0.587  -5.398 -15.047   1.564  -5.786 -13.847
  -0.209  -6.055 -13.199   0.107  -6.860 -13.504  -1.441  -5.426 -12.579  -2.204
  -5.961 -12.817  -3.173  -5.803 -12.246  -1.902  -6.865 -14.191  -1.973  -4.412
 -15.124  -1.241  -3.831 -15.736  -1.909  -2.979 -16.827   2.806  -2.002 -16.325
   3.701  -1.634 -15.808   1.670  -2.287 -14.862   2.167  -2.503 -15.637   1.013
  -1.434 -17.890   2.268  -1.124 -17.802   2.353   0.536 -19.130   2.191   1.104
 -16.989   3.555   0.830 -17.024   1.036   1.009 -17.612  -0.263   0.678 -18.510
  -0.324   1.293 -17.864  -0.285  -0.382 -16.745  -1.436   1.040 -17.350  -2.335
   1.159 -15.749  -1.698   0.017 -14.793  -2.496   0.590 -15.287  -3.447   0.790
 -13.593  -2.650  -0.314 -13.020  -1.568  -0.828 -13.448  -0.581  -0.733 -11.865
  -1.576  -1.533 -11.504  -0.671  -2.000 -11.341  -2.887  -1.742 -10.408  -3.043
  -2.594  -9.994  -3.954  -2.728 -10.102  -2.263  -3.158 -11.845  -3.985  -1.190
 -13.012  -3.883  -0.475 -13.456  -4.861   0.075 -15.899  -1.211   2.394 -15.670
  -0.187   2.688 -14.589  -1.944   1.976 -13.801  -1.191   2.012 -14.285  -2.753
   2.641 -16.543  -1.881   3.457 -16.095  -1.807   4.959 -17.183  -2.418   5.641
 -15.672  -0.422   5.270 -14.806  -2.769   5.036 -15.083  -4.124   5.293 -15.532
  -4.167   6.285 -15.803  -4.501   4.566 -13.743  -4.911   5.376 -14.040  -5.959
   5.436 -13.071  -4.774   4.128 -11.729  -4.797   4.334 -11.296  -5.787   4.478
 -11.008  -4.286   3.178 -11.162  -3.035   2.650 -11.831  -2.273   3.022 -10.365
  -2.781   1.641  -9.726  -4.020   1.416  -8.831  -4.592   0.456  -8.355  -3.990
  -0.589  -7.749  -4.566  -1.156  -8.576  -3.036  -0.835  -8.524  -5.930   0.407
  -8.790  -6.607   1.540  -8.406  -7.611   1.643  -9.627  -6.224   2.499 -10.065
  -4.930   2.371 -12.686  -4.559   6.511 -13.034  -3.760   7.165 -11.514  -4.020
   5.670 -11.647  -2.961   5.447 -10.569  -4.280   6.147 -12.391  -5.733   7.294
 -11.404  -5.699   8.549 -11.681  -6.900   9.324 -11.415  -4.413   9.201 -10.067
  -5.883   7.802  -9.627  -7.146   7.338  -9.547  -7.866   8.152 -10.400  -7.505
   6.658  -8.215  -7.111   6.640  -7.888  -8.138   6.475  -8.366  -6.294   5.466
  -7.080  -5.688   5.329  -6.361  -6.472   5.091  -6.936  -4.612   4.248  -7.302
  -3.286   4.235  -7.818  -2.780   5.038  -6.981  -2.664   3.155  -6.291  -3.592
   2.402  -5.635  -3.536   1.148  -5.542  -2.496   0.353  -5.114  -2.609  -0.555
  -6.143  -1.712   0.565  -4.931  -4.618   0.746  -4.948  -5.714   1.470  -4.231
  -6.441   1.120  -5.591  -5.946   2.613  -6.290  -4.830   3.025  -7.198  -6.395
   7.571  -7.645  -6.084   8.516  -6.752  -5.188   6.774  -7.451  -4.364   6.922
  -5.688  -4.972   6.870  -6.205  -7.441   7.765  -4.858  -7.343   8.726  -4.431
  -8.617   9.282  -4.955  -6.217   9.615  -3.778  -6.900   7.617  -3.360  -7.796
   6.649  -2.754  -8.576   7.110  -4.216  -8.329   6.235  -2.578  -7.137   5.491
  -2.353  -7.969   4.825  -3.172  -6.083   4.789  -2.219  -5.305   4.160  -2.135
  -5.610   3.117  -2.665  -3.849   4.296  -3.309  -3.365   5.464  -3.628  -4.077
   6.211  -3.299  -2.004   5.629  -3.633  -1.616   6.580  -2.805  -1.226   4.576
  -2.648   0.045   4.691  -2.156   0.600   4.005  -2.952   0.531   5.522  -2.265
  -1.658   3.463  -2.176  -3.014   3.274  -1.690  -3.468   2.262  -1.237  -6.649
   6.026  -1.341  -6.155   6.992  -0.907  -5.649   4.931  -0.317  -4.804   5.288
  -0.202  -6.199   4.307  -0.295  -7.646   6.157   1.252  -7.510   6.724   1.812
  -8.879   6.996   1.093  -6.578   7.884   2.115  -6.782   5.546   2.485  -7.464
   4.391   2.874  -8.452   4.638   1.651  -7.783   3.765   3.433  -6.650   3.511
   3.778  -7.209   2.641   2.745  -5.449   3.074   3.662  -4.422   3.035   4.234
  -4.510   2.111   2.919  -3.076   2.942   1.896  -2.514   3.649   1.468  -2.992
   4.519   1.342  -1.474   3.078   2.118  -1.291   1.930   2.048  -0.259   0.930
   1.305   0.661   0.932   3.019  -0.396  -0.144   3.103   0.303  -0.869   4.039
  -1.371  -0.085   4.829  -1.581  -1.062   4.771  -1.049  -1.919   5.325  -2.458
  -1.003   4.112  -2.315   0.855   3.173  -2.182   1.866   4.702  -6.151   4.137
   4.895  -6.449   5.168   4.715  -4.628   4.126   4.326  -4.290   5.086   5.669
  -4.184   3.840   5.819  -6.558   3.335   7.379  -6.342   3.809   7.978  -7.741
   3.788   7.382  -5.712   5.144   8.081  -5.424   2.786   8.214  -5.718   1.379
   8.885  -6.570   1.274   7.233  -6.011   1.004   8.726  -4.528   0.534   8.851
  -4.773  -0.521   7.714  -3.450   0.515   8.410  -2.146   0.645   8.712  -1.898
  -0.373   7.492  -1.158   1.294   7.019  -1.351   2.537   7.251  -2.267   3.060
   6.260  -0.394   3.153   5.712  -0.628   4.493   6.479  -1.240   4.969   5.707
   0.277   5.100   4.684  -0.990   4.478   5.843   0.843   2.433   5.064   1.701
   2.809   6.309   0.898   1.121   6.091   1.672   0.509   7.189   0.011   0.535
   7.727   0.241  -0.561  10.094  -3.978   1.040  10.425  -4.537   1.915   9.630
  -2.533   1.488   9.303  -2.591   2.527  10.524  -1.937   1.307  11.101  -4.006
   0.008  12.608  -3.677   0.288  13.486  -4.517  -0.578  12.942  -3.648   1.786
  12.573  -2.178  -0.326  12.565  -1.895  -1.746  13.425  -2.418  -2.163  11.652
  -2.229  -2.240  12.603  -0.404  -2.189  12.533  -0.444  -3.276  11.455   0.173
  -1.601  11.774   1.386  -0.966  11.918   2.219  -1.653  10.782   1.884   0.003
  10.787   1.477   1.333  11.499   0.755   1.704   9.961   2.062   2.268   9.979
   1.508   3.702  10.381   2.218   4.425   8.951   1.235   3.939  10.604   0.616
   3.669   9.062   3.169   1.889   8.153   3.647   2.545   9.343   3.630   0.639
   8.794   4.454   0.438  10.137   3.060  -0.344  10.093   3.529  -1.492  13.833
   0.338  -1.654  14.514  -0.409  -1.246  13.233   1.079  -0.468  13.148   0.420
   0.395  13.748   2.021  -0.277  14.369   1.261  -2.636  15.735   2.051  -2.537
  16.325   2.103  -3.920  16.518   1.511  -1.445  15.308   3.559  -2.183  14.419
   4.315  -3.014  14.819   4.542  -4.002  13.506   3.753  -3.212  13.918   5.618
  -2.417  13.438   6.194  -3.208  12.928   5.453  -1.427  12.947   6.603  -0.643
  12.467   7.437  -1.155  12.213   6.504   0.607  12.203   5.494   1.518  12.764
   4.575   1.430  11.266   5.617   2.421  10.763   6.879   2.167   9.777   7.650
   2.867   9.037   7.319   3.795   9.469   8.885   2.315   8.852   9.474   2.855
  10.322   9.375   1.396  10.102  10.558   0.871   9.360  11.146   1.221  10.790
  10.837   0.186  11.188   8.733   0.667  11.361   7.451   1.113  14.996   6.492
  -1.833  15.900   5.909  -1.659  14.382   6.850  -0.480  14.833   6.212   0.281
  14.511   7.909  -0.257  15.204   7.540  -2.733  16.253   8.735  -2.481  16.522
   9.168  -3.907  17.342   8.193  -1.649  15.535  10.001  -1.750  14.337  10.498
  -2.272  14.602  10.920  -3.242  13.669   9.644  -2.378  13.607  11.588  -1.430
  12.858  12.055  -2.069  12.982  11.110  -0.227  13.254  11.981   0.788  12.644
  12.880   0.696  12.986  11.370   2.100  13.388  10.097   2.439  13.983   9.533
   1.736  12.870   9.611   3.553  12.144  10.746   4.060  11.239  10.929   5.159
  10.988  10.233   6.149  10.500  12.074   5.120   9.912  12.457   5.846  10.699
  13.037   4.289  10.002  14.086   4.501   9.417  14.153   5.321  10.181  14.889
   3.915  11.552  13.027   3.228  12.144  11.795   3.125  14.533  12.684  -1.007
  15.458  12.415  -1.518  14.689  12.437   0.465  15.289  11.549   0.666  15.105
  13.225   1.094  14.045  13.942  -1.278  14.341  14.293  -2.121   3.657  14.979
  12.072   4.021  15.105  11.192   4.275  16.479  11.023   5.042  16.807  11.724
   3.343  17.028  11.155   4.818  16.813   9.685   5.027  17.882   9.698   6.127
  16.146   9.691   6.270  15.505   8.403   6.691  16.275   7.757   7.211  14.389
   8.518   7.088  13.461   9.549   6.570  13.734  10.457   7.746  12.294   9.380
   7.819  11.597  10.201   8.596  12.075   8.282   9.462  11.080   8.331  10.043
  10.833   7.543   9.613  10.601   9.207   8.809  12.990   7.353   8.175  14.176
   7.477   8.396  14.999   6.659   3.993  16.348   8.440   2.989  16.027   8.718
   4.789  15.131   7.984   4.478  14.185   8.427   4.722  15.049   6.900   4.114
  17.428   7.556   3.019  17.593   6.376   2.995  18.949   5.822   1.686  17.142
   6.861   3.564  16.554   5.171   4.763  16.893   4.434   4.512  17.672   3.714
   5.565  17.181   5.114   5.381  15.747   3.600   6.156  16.354   3.132   5.842
  14.677   4.319   6.116  13.665   3.457   6.939  13.922   2.790   6.433  12.397
   4.176   5.684  12.053   5.261   4.983  12.790   5.623   5.902  10.838   5.837
   5.205  10.609   6.630   7.006   9.984   5.358   7.335   8.822   5.790   7.810
   8.267   5.093   6.687   8.407   6.443   7.669  10.299   4.314   7.399  11.495
   3.672   8.001  11.660   2.651   4.515  15.130   2.480   3.463  15.273   2.724
   4.840  13.626   2.648   3.984  13.142   3.119   4.874  13.141   1.672   4.867
  15.570   1.236   3.903  15.442  -0.069   4.125  16.602  -0.938   2.458  14.989
   0.245   4.631  14.196  -0.843   6.030  14.276  -1.326   6.149  15.037  -2.097
   6.687  14.456  -0.476   6.547  13.080  -2.233   7.317  13.544  -2.849   7.015
  11.967  -1.436   6.400  10.848  -1.990   6.988  10.479  -2.831   6.088   9.906
  -0.931   5.458  10.138   0.236   4.870  11.036   0.359   5.348   9.061   0.976
   6.264   8.204   0.440   6.847   6.908   0.745   6.651   6.170   1.881   7.223
   5.353   2.043   5.919   6.503   2.492   7.724   6.258  -0.051   8.055   6.911
  -1.133   8.733   6.350  -1.758   7.611   8.067  -1.612   6.702   8.669  -0.786
   5.497  12.581  -3.234   4.638  13.239  -3.368   5.025  11.257  -2.596   4.310
  11.477  -1.804   4.656  10.519  -3.308   6.275  12.280  -4.409   5.500  11.979
  -5.810   6.364  12.522  -6.897   4.057  12.355  -5.719   5.563  10.356  -5.787
   6.837   9.674  -5.782   7.436  10.068  -6.603   7.467   9.951  -4.937   6.766
   8.167  -5.821   7.761   7.861  -6.145   6.504   7.554  -4.615   5.631   6.478
  -4.777   6.220   5.635  -5.138   5.021   6.057  -3.527   4.106   6.700  -2.808
   3.608   7.602  -3.130   3.891   6.267  -1.574   4.715   5.106  -1.568   5.004
   4.142  -0.516   4.515   4.139   0.665   4.582   3.329   1.265   3.918   4.915
   0.912   5.856   3.187  -0.783   6.516   3.177  -1.969   7.128   2.312  -2.178
   6.395   4.053  -2.954   5.469   5.061  -2.730   5.695   7.669  -6.892   5.247
   8.530  -7.387   4.698   7.045  -5.861   4.027   7.780  -5.415   4.036   6.300
  -6.302   6.368   6.732  -7.720   5.550   5.973  -8.849   6.582   5.781  -9.942
   4.331   6.706  -9.122   5.266   4.482  -8.287   6.422   3.642  -7.976   6.834
   3.307  -8.927   7.227   4.172  -7.468   6.223   2.406  -7.160   7.140   1.824
  -7.064   5.807   2.717  -5.804   4.922   1.688  -5.382   5.386   0.743  -5.100
   3.934   2.191  -4.410   3.273   3.374  -4.641   3.520   4.012  -5.477   2.365
   3.792  -3.708   1.766   4.689  -3.761   2.078   2.984  -2.554   1.209   3.341
  -1.563   1.125   2.680  -0.804   0.926   4.310  -1.588   2.654   1.745  -2.437
   3.575   1.372  -3.359   4.078   0.289  -3.206   5.147   1.421  -7.789   4.562
   1.830  -8.612   4.233   1.287  -6.629   3.351   1.886  -6.854   3.759   0.307
  -6.695   5.620   0.160  -8.139   4.776  -1.001  -8.970   5.711  -1.794  -9.809
   3.665  -0.325  -9.682   4.158  -1.876  -7.788   4.978  -2.583  -6.908   5.395
  -3.398  -7.500   5.655  -1.855  -6.462   4.075  -3.253  -5.851   4.682  -3.799
  -5.129   3.376  -2.299  -5.105   2.271  -2.958  -4.528   2.665  -3.615  -3.754
   1.200  -2.083  -3.942   0.428  -1.130  -4.568   0.584  -0.845  -5.597  -0.549
  -0.668  -3.770  -0.294  -1.290  -2.560  -0.904  -1.194  -1.308  -1.738  -0.395
  -0.930  -0.582  -2.276  -0.463  -1.073  -2.348   0.417   0.405  -3.189  -0.691
   0.553  -4.133   0.233   0.000  -3.916   1.050   1.278  -4.836   0.195   1.149
  -3.204  -1.793   0.678  -2.259  -2.673   3.007  -4.239  -6.431   2.978  -4.109
  -7.513   1.745  -3.835  -5.695   1.231  -3.128  -6.347   1.071  -4.637  -5.392
   3.558  -5.559  -6.197   2.949  -6.949  -6.940   4.048  -7.972  -7.050   2.134
  -6.605  -8.171   1.874  -7.337  -5.751   2.303  -8.072  -4.613   2.716  -9.045
  -4.877   3.071  -7.405  -4.221   1.185  -8.106  -3.657   1.455  -8.611  -2.729
   0.719  -6.794  -3.149  -0.595  -7.059  -2.616  -0.459  -7.269  -1.555  -1.569
  -5.911  -2.717  -1.953  -5.277  -3.908  -1.474  -5.617  -4.814  -2.706  -4.166
  -3.893  -3.096  -3.488  -5.112  -2.388  -3.796  -5.882  -4.142  -3.596  -5.397
  -2.890  -2.418  -5.073  -3.279  -3.710  -2.610  -3.853  -2.655  -2.364  -3.060
  -4.496  -1.499  -3.537  -4.394  -0.615  -2.289  -5.636  -1.524  -2.217  -6.303
  -0.486   0.063  -8.894  -4.264  -0.116  -8.555  -5.284  -1.077  -8.377  -3.324
  -1.978  -8.223  -3.917  -1.278  -9.037  -2.480   0.371 -10.257  -4.228  -0.593
 -11.354  -4.820   0.079 -12.700  -4.841  -1.183 -10.713  -6.023  -1.937 -11.506
  -3.790  -1.740 -12.236  -2.559  -1.580 -13.279  -2.833  -0.907 -11.860  -1.965
  -3.016 -12.099  -1.663  -2.792 -12.519  -0.683  -3.421 -10.733  -1.550  -4.818
 -10.809  -1.504  -5.148 -11.301  -0.590  -5.449  -9.460  -1.810  -5.080  -8.844
  -2.978  -4.581  -9.502  -3.674  -5.454  -7.568  -3.266  -5.240  -6.915  -4.711
  -4.323  -6.330  -4.783  -5.088  -7.838  -5.270  -6.075  -6.322  -5.085  -6.304
  -6.782  -2.261  -6.582  -5.626  -2.350  -6.767  -7.527  -1.201  -7.474  -7.216
  -0.551  -6.426  -8.865  -0.985  -6.880  -9.330   0.074  -4.217 -12.944  -2.197
  -3.963 -13.567  -3.055  -5.225 -11.836  -2.501  -4.949 -11.507  -3.503  -6.286
 -12.085  -2.492  -4.600 -13.782  -1.169  -5.537 -15.022  -1.437  -5.507 -15.813
  -0.218  -5.103 -15.712  -2.659  -6.967 -14.462  -1.691  -7.844 -14.186  -0.632
  -8.186 -15.177  -0.332  -7.342 -13.780   0.246  -9.126 -13.394  -0.910  -9.757
 -13.485  -0.026  -8.845 -12.009  -1.212  -9.871 -11.639  -2.035 -10.772 -11.576
  -1.425  -9.649 -10.282  -2.684  -9.063  -9.949  -3.918  -8.593 -10.729  -4.499
  -9.018  -8.720  -4.183  -9.731  -8.152  -3.117 -10.120  -6.761  -2.902  -9.749
  -5.760  -3.523 -10.911  -6.577  -1.833 -11.199  -5.655  -1.538 -11.276  -7.588
  -0.977 -11.880  -7.265   0.103 -12.351  -6.377   0.205 -12.146  -7.941   0.804
 -10.912  -8.839  -1.076 -10.167  -9.090  -2.210  -9.968 -14.023  -2.005  -9.416
 -14.775  -2.569  -9.988 -12.821  -2.973  -9.081 -12.874  -3.576 -10.880 -12.918
  -3.591 -11.202 -14.386  -1.375 -12.550 -14.731  -2.205 -13.386 -15.643  -1.400
 -12.206 -15.181  -3.526 -13.148 -13.322  -2.198 -13.675 -12.608  -1.042 -14.302
 -13.218  -0.391 -12.803 -12.230  -0.507 -14.692 -11.474  -1.384 -14.956 -11.060
  -0.411 -13.986 -10.432  -2.137 -14.905  -9.848  -2.973 -15.665  -9.401  -2.332
 -14.236  -8.925  -3.804 -13.363  -9.167  -4.803 -13.144 -10.160  -5.168 -12.971
  -8.133  -5.504 -13.520  -7.034  -4.800 -13.412  -5.586  -5.009 -12.679  -4.917
  -5.793 -14.098  -4.854  -4.045 -13.957  -3.865  -4.187 -14.871  -5.426  -3.070
 -15.703  -4.635  -2.406 -15.707  -3.638  -2.572 -16.551  -5.072  -2.073 -15.053
  -6.762  -2.949 -14.273  -7.541  -3.779 -15.945 -11.803  -2.266 -15.952 -12.857
  -2.545 -15.653 -11.101  -3.576 -14.896 -11.561  -4.211 -16.561 -10.769  -4.080
 -17.233 -11.403  -1.758 -17.885 -11.343  -2.460
#!/usr/bin/tcsh
#	Example script to run a MD trajectories whose coordinate
#	format is GROMOS. All irrelevent variables are commented out.
#	Read the manuals for further explanation.
setenv  status  On		# setenv Program progress - On
setenv  dna_or_protein  dna 	#Is it DNA or Protein?
# setenv nresidue  		#Number of residues- relevent for protein.
# setenv chain  		#Irrelevent for DNA. For Protein, the chain
#				#name
# setenv start_residue 		#In case of proteins, the residue to start the
#				#analysis from.
# setenv end_residue 		#In case of proteins, the residue to end the
#				#analysis at.
setenv nucleotide  10		#Number of nucleotide units/strand.
setenv sequence  "CCAACGTTGG"
#setenv sequence "CGAACG"	#One letter nucleotide sequence for the left
				#hand strand only
setenv insert_into_bdna  no	#Read the manual for insertion into 
setenv insert_into_adna  no	#straight helical axes.
setenv frequency  1		#Choose every frequency'th structure for
#				#analysis.
# setenv distance_tolerance  	#Used in determining connectivities.
#				#If you get errors about missing
#				#connectivities, increase this slightly,
#				# setenv upto .4. If problems exist even after
#				#that, check your coordinates.
setenv include_first  no 	#Show the values for the first structure in
#				#the graphics.
setenv draw_structures  plate	#Create strn.pdb files with just the plates.
setenv drawing_type  dynamics	#Use dynamics data structure.
setenv user_notes "Vickie Structure Results"	#Some notes.
setenv coord_format pdb		#The file is in PDB format.
setenv additional_file_format Dynamics  #Additional file is in COR format.
setenv do_plotting  yes		# Don't do the graphics now.
#				#I wish to edit the winlim.dat from the
#				#dials_and_windows before producing graphics.
setenv layout  0		#Use the layout0.dat file.
#setenv device  		#set the device to Post, for example.
setenv start_time 0.		#First structure corresponds to 20 ps
setenv time_interval 2.		#Every subsequent structure is after 20ps.
# setenv canonical_dials 		#All these default to YES.
# setenv canonical_helics 		#Which means, All canonical "Dials" and
# setenv canonical_junctions 	#"Windows" will be drawn.
# setenv minmax_dials 		#All these default to NO.
# setenv minmax_helics 
# setenv minmax_junctions 	#Don't show average or min and max values.
# setenv average_dials 
# setenv average_helics 
# setenv average_junctions 	#Upto here.
# setenv labels 		#I don't want any labels.
# setenv patterns 		#No patterns also.
# setenv canonical_patterns 	#No to this one too.
# setenv draw_dials 		#The next three default to yes, meaning
# setenv draw_helics 		#draw all the dials and windows.
# setenv draw_junctions 	#Set them to "No" if you want.
setenv for007 ../../r/massaged.pdb #I wish to analyze the Dickerson crystal
setenv for008 ../md5.21st   	#Dynamics results.
dials_and_windows		#I have the defined PATH to include the 

Attachment Converted: "c:\eudora\attach\massaged.pdb"