AMBER Archive (1999)

Subject: energy decomposition

From: Andrea Bernini (andrea_at_neriserv.chim.unisi.it)
Date: Wed Dec 01 1999 - 06:31:27 CST

Dear amber users,
I already use anal to calculate energy of the non-bonded interaction
energy at the interface of a minimised two proteins complex using
groups, but how can I exclude the residual intramolecular interactions
and take in account only the inter-protein ones ?

Thanks in advance, Andrea.
______________________________________________

Dr. Andrea Bernini, Ph.D.
Molecular Biology Dept.
University of Siena
Via Fiorentina 1, 53100 Siena, Italy
Phone +39 577 234911
Fax +39 577 234903