CaBP Data Library General Information

Information in the EF-Hand Calcium-Binding Proteins Database from Reference 18

Protein
Species
Information
Comment
Submitted By
Validated By
calbindin D9k
Bos taurus
(cow or bovine)
structure by x-ray crystallography (pdb entry 5ICB) of full length protein
  • bound to 0 ion of Mg

Melanie R. Nelson
The Scripps Research Institute, Department of Molecular Biology
mnelson@scripps.edu
Melanie R. Nelson
mnelson@scripps.edu
calbindin D9k
Bos taurus
(cow or bovine)
structure by x-ray crystallography (pdb entry 6ICB) of full length protein
  • bound to 0 ion of Mn

Melanie R. Nelson
The Scripps Research Institute, Department of Molecular Biology
mnelson@scripps.edu
Melanie R. Nelson
mnelson@scripps.edu
calbindin D9k
no species information The conformational change between apo and one magnesium ion bound states involves:
  • One magnesium ion binds to site II.
    The conformation of the Mg1 state is distinct form the apo or Ca2 state.
    Helical packing is more compact. In particular, the angle between helix III and IV is ~25 degrees less in the Mg1 state than in the calcium-loaded or apo states.

Melanie R. Nelson
The Scripps Research Institute, Department of Molecular Biology
mnelson@scripps.edu
Melanie R. Nelson
mnelson@scripps.edu
calbindin D9k
no species information The conformational change between apo and one manganese ion bound states involves:
  • One manganese ion binds to site II.
    The conformation of the Mn1 state is distinct form the apo or Ca2 state, but very similar to the Mg1 state.
    Helical packing is more compact than in the apo or Ca2 states. In particular, the angle between helix III and IV is ~25 degrees less in the Mn1 state than in the calcium-loaded or apo states.

Melanie R. Nelson
The Scripps Research Institute, Department of Molecular Biology
mnelson@scripps.edu
Melanie R. Nelson
mnelson@scripps.edu