DD TIP3 solvated with Na+ counterions; initial minimization of solvent	and ions with dsCGCGAATTCGCG fixed; BSC, JC & ions08 parameters; 	SHAKE off.
 &cntrl
  imin = 1,
  maxcyc = 1000,
  ncyc = 500,
  ntb = 1,
  ntr = 1,
  cut = 10
 /
Hold the DNA fixed  
500.0
RES 1 24
END
END