AMBER Archive (2009)

Subject: [AMBER] Regarding Urey-Bradley term in amber calculation

From: aneesh cna (aneeshcna_at_gmail.com)
Date: Tue Nov 24 2009 - 00:48:04 CST

Dear amber users,
I would like to keep "Urey-Bradley" term in angle potential form , in which
takes the form of a harmonic interaction between the i-k sites of the
covalently bonded triplet
i-j-k (angle). How can I add angle distance term ( i-k distance) in Amber
functional form for angle bending?. Waiting for your valuable reply

Thanks in advance
Aneesh
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