AMBER Archive (2009)

Subject: [AMBER] hbond analysis by ptraj- segmentation fault

From: Jayalakshmi Sridhar (jsridhar_at_xula.edu)
Date: Mon Nov 23 2009 - 09:51:00 CST

   Dear Amber Users,
   I am trying to do Hbond analysis using ptraj on the md trajectory file. I
   have stripped the trajectory of water and ions. I have tried running the
   script on the .mdcrd file, but everytime I get the error- Segmentation fault
   (core dumped). I am attaching the output file and also the input file. Thank
   you for the help in sorting out this problem.
   Jaya.





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