AMBER Archive (2009)

Subject: Re: [AMBER] Segmentation fault in antechamber

From: albert albert (albertassonke_at_googlemail.com)
Date: Mon Nov 23 2009 - 09:23:00 CST


Thanks for this remark....
You're wright.

On Wed, Nov 18, 2009 at 5:28 AM, case <case_at_biomaps.rutgers.edu> wrote:

> On Tue, Nov 17, 2009, albert albert wrote:
> >
> > The pdb is linked.
>
> The idea is that you give a pdb-formatted file for a *single residue* or a
> small organic molecule to antechamber. It looks like you tried to feed it
> an
> entire pdb file with several hundred residues(?). Of course, this should
> provide a better error message, but it will never work.
>

There is a way to observe the interaction dynamic between two residues?

>
> [If, in fact, you did not send antechamber the entire file, then please
> give
> explicit details of exactly what was done.]
>
> ...dac
>
>
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Warm regards

Albert
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