AMBER Archive (2009)

Subject: [AMBER] Task is running on supercomputer without any output

From: Andrew Voronkov (
Date: Mon Nov 09 2009 - 06:39:36 CST

Dear Amber users,
I don't understand the situation - the task is running on supercomputer during 50 hours, no output is produced but log file shows an error which has happened a day ago.

The log files shows error but the task keeps runing. The command was the next:

 mpirun -np 128 -p 10 $AMBERHOME/exe/sander.MPI sander -O -i -o fzd10_w_md2.out -p fzd10_w.prmtop -c fzd10_w_md1.rst -r fzd9_w_md2.rst -x fzd10_w_md2.mdcrd

Sincerely yours,

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