AMBER Archive (2009)

Subject: Re: [AMBER] minimization error

From: case (
Date: Fri Oct 02 2009 - 07:00:52 CDT

On Fri, Oct 02, 2009, balaji nagarajan wrote:
> I have build a model for DNA junction.
> 2) when i do the minimization in vaccum it
> sander got stoped and it gave the following error
> ----------------------------------------------------------
> At line 1262 of file _ew_box.f
> Fortran runtime error: Bad value during integer read

Look at your input file: my guess is that you have an incorrect value for ntb;
note that the default value is 1.

Also, are you sure you want to doing a vacuum minimization for a DNA junction?


AMBER mailing list