AMBER Archive (2009)

Subject: [AMBER] Protein and charged surface

From: rrd (
Date: Thu Oct 01 2009 - 22:49:18 CDT


I woul like to ask you, if is it possible to simulate my problem with Amber. I would like to simulate some protein interacting with water
and with solid surface (which is charged). I know nothing about structure of surface (for now), but I need simulate behaviour of protein near charged surface. Would you please tell me, if is it possible?

Thank you for answers,


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