AMBER Archive (2009)

Subject: [AMBER] xleap problem !

From: balaji nagarajan (balaji_sethu_at_hotmail.com)
Date: Wed Sep 30 2009 - 13:40:58 CDT

Dear Amber ,

 

 

I have built DNA models using crystal structure.,

I have converted it to mol2 file the file has some missing phosphate atoms , When i load this file in Xleap using

 

model = loadmol2 "inp.mol2"

 

 

it is being loaded , but it did not place the missing atoms

like P OP1 OP2 ( phosphate atoms and its oxygen )

 

 

thanks in advance

regards

balaji

UOM

 
                                               
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