AMBER Archive (2009)
Subject: [AMBER] loading PDB of a RNA sequence
From: gunajyoti das (guna_das78_at_yahoo.co.in)
Date: Tue Sep 08 2009 - 05:31:47 CDT
Hello amber users'
I have tried to load a RNA sequence obtained from the PDB file 1DRZ, but xleap colud not generate the prmtop and inpcrd files. When i tried a DNA sequence i could generate the prmtop and inpcrd files.
Please help me how to write the commands for a RNA sequence.
Thanks a lot,
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