AMBER Archive (2009)

Subject: [AMBER] how to give force values in TMD

From: balaji nagarajan (balaji_sethu_at_hotmail.com)
Date: Wed Sep 02 2009 - 05:03:41 CDT


Dear AMBER

I have gone through the TMD page of the amber 9 manual .,
I have a doubt regarding the calculation of the TGTMDFRC value,
can any one can explain how to give the value suppose one gives a value
of TGTMDFRC as 0.01 . I have seen in papers they will write force in terms of Kcal/Mol/A^2.

how to convert the given value

what is the nature of the force in Newton or pico Newton in amber

thanks in advance
regards
balaji

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