AMBER Archive (2009)

Subject: Re: [AMBER] MM_PBSA not successful

Date: Sat Aug 15 2009 - 17:10:08 CDT


Are you running the script using a cluster machine? If so, sometimes,
the error message does not appear...

When you try to run by hand:

/u0/z/zz217/USG/amber/9.0/exe/pbsa -O -i -o pbsa_com.1.out -c ./snapshot_com.crd.1 -p ./GNNQQNYMYRSB.prmtop

What does it say? Is there any error message in pbsa_com.1.out?


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