AMBER Archive (2009)

Subject: [AMBER] Installing Amber10 on Ubuntu

From: David Dubins (
Date: Wed Jul 29 2009 - 13:50:12 CDT


I have followed a variety of recommendations from the newsgroup and
managed to compile a serial copy of Amber10 on the latest version of
Ubuntu. I built amber using gfortran with the -nopar option. During
the test procedure, I received the following error:

cd LES && ./Run.PME_LES

   Amber 8 ADDLES and SANDER.LES test:

   ./Run.PME_LES: Program error
make: *** [test.sander.LES] Error 1

Everything else seems to be running swimmingly. I am new to both
Ubuntu and Amber, so if the answer is obvious, I apologize for my
ignorance. Any help would be greatly appreciated!

With warm regards,

David Dubins, Ph.D., B.Eng.
Leslie Dan Faculty of Pharmacy
University of Toronto
144 College Street
Toronto, Ontario
M5S 3M2
Telephone 647-891-8685

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