AMBER Archive (2009)

Subject: [AMBER] residues lacking connect0/connect1

From: Jio M (
Date: Mon Jul 27 2009 - 11:10:06 CDT

Dear Amber Users,

I have joined five residues (not in a linear manner) and dissolved it
in water. later while saving prmtop inpcrd files following message came
after building topology....

not marking per residue atom chain types

marking per residue atom chain types {it is normally displayed}

(residues lacking connect0/connect1

-- these dont have chain types marked) {what does this mean}

is it an error or warning?

if it is a warning what problem it can create further.

the prmtop and inpcrd files were generated

any suggestions are appreciated



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