AMBER Archive (2009)

Subject: Re: [AMBER] amber dihedral format

From: case (case_at_biomaps.rutgers.edu)
Date: Sun Jul 12 2009 - 16:49:12 CDT

On Sun, Jul 12, 2009, s. Bill wrote:

> I want to implement some dihedral angels from one paper in amber, the
> problem is that I don't know how to convert it to amber format.

Since we don't know what paper you have been reading, you will have to figure
out for youself what equation was being used there, and translate that to the
Amber conventions. The amber file formats are discussed here:

   http://ambermd.org/formats.html

...dac

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