AMBER Archive (2009)

Subject: [AMBER] how to add water for membrane, in Z direction only or xyz

From: xueqin pang (
Date: Thu Jun 04 2009 - 03:13:07 CDT

Hello everyone,
I am doing computational stimulation of GPCR now. I want to know after inserting GPCR into lipid bilayers, how to add water molecular to the whole system, in Z direction only or all the three directions(X Y Z) while the lipid bilayer is in the xy plane?
Thanks very much
Pang Xueqin
State Key Laboratory of Molecular Reaction Dynamics
Dalian Institute of Chemical Physics
Chinese Academy of Sciences.
Tel: +86-411-84379352 Fax: +86-411-84675584

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