AMBER Archive (2009)

Subject: [AMBER] Minimization on MM-PBSA

From: Rubben Torella (
Date: Thu May 28 2009 - 10:23:07 CDT

Hi AMber users,
I'm using MM-PBSA in order to calculate the relative free energy of binding
of a complex.
My question is: during the MM-PBSA calculation, is done any minimization
process? If not, is it possible to add the minimization process before the
MM-PBSA calculation, after the snapshots generation?
Thank you very much!
Best regards
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