AMBER Archive (2009)

Subject: [AMBER] Re: How to know that the md is stable in equilibration run

From: nicholus bhattacharjee (nicholusbhattacharjee_at_gmail.com)
Date: Mon May 25 2009 - 11:11:39 CDT


Another query is that is there a optimum rmsd value between my starting
structure and the final structure (the structure I got after md). Someone
said that the rmsd should not be more than 2 Armstrong. Is it so?
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