AMBER Archive (2009)

Subject: [AMBER] adding a standard amino acid as ligand

From: sheerychen (
Date: Fri May 15 2009 - 04:37:51 CDT

Hello, everyone. I want to add a standard amino acid (lysine) as the ligand
to the protein complex. Is there any method to deal with this ligand just
with xleap or I have to deal with it as normal ligand with antechamber? I
add TER before and after it, but leap will just treat it as normal
C-terminal acid.
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